ProDom and ProDom-CG: tools for protein domain analysis and whole genome comparisons
AUTOR(ES)
Corpet, Florence
FONTE
Oxford University Press
RESUMO
ProDom contains all protein domain families automatically generated from the SWISS-PROT and TrEMBL sequence databases (http://www.toulouse. inra.fr/prodom.html ). ProDom-CG results from a similar domain analysis as applied to completed genomes (http://www.toulouse.inra.fr/prodomCG.html ). Recent improvements to the ProDom database and its server include: scaling up to include sequences from TrEMBL, addition of Pfam-A entries to the set of expert validated families, assignment of stable accession numbers, consistency indicators for domain families, domain arrangements of sub-families and links to Pfam-A.
ACESSO AO ARTIGO
http://www.pubmedcentral.nih.gov/articlerender.fcgi?artid=102458Documentos Relacionados
- The ProDom database of protein domain families.
- Recent improvements of the ProDom database of protein domain families.
- The ProDom database of protein domain families: more emphasis on 3D
- Predicting Gene Ontology Functions from ProDom and CDD Protein Domains
- Evolutionary Analysis by Whole-Genome Comparisons
