Genome Mapping
Mostrando 1-12 de 1456 artigos, teses e dissertações.
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1. Association mapping of drought tolerance indices in wheat: QTL-rich regions on chromosome 4A
ABSTRACT Drought is likely the main abiotic stress that affects wheat yield. The identification of drought-tolerant genotypes represents an effective way of dealing with the continuous decrease in water resources as well as the increase in world population. The aim of this study was to identify single nucleotide polymorphisms (SNP) associated with drought to
Sci. agric. (Piracicaba, Braz.). Publicado em: 02/09/2019
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2. Chromosomal distribution of the retroelements Rex 1, Rex 3 and Rex 6 in species of the genus Harttia and Hypostomus (Siluriformes: Loricariidae)
RESUMO Os elementos transponíveis (TE) têm sido amplamente aplicados como marcadores cromossômicos. Contudo, em Loricariidae, há poucas análises de mapeamento físico destes elementos. Considerando a importância de elementos transponíveis para a evolução cromossômica e organização genômica, este trabalho realizou o mapeamento físico cromossômi
Neotrop. ichthyol.. Publicado em: 18/07/2019
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3. Linkage disequilibrium and past effective population size in native Tunisian cattle
Abstract To carry out effective genome-wide association studies, information about linkage disequilibrium (LD) is essential. Here, we used medium-density SNP chips to provide estimates of LD in native Tunisian cattle. The two measures of LD that were used, mean r2 and D’, decreased from 0.26 to 0.05 and from 0.73 to 0.40, respectively, when the distance be
Genet. Mol. Biol.. Publicado em: 18/02/2019
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4. Genome-wide Analysis of LBD (LATERAL ORGAN BOUNDARIES Domain) Gene Family in Brassica rapa
ABSTRACT LOB (lateral organ boundaries)-domain proteins define a family of plant-specific transcription factors involved in developmental process from embryogenesis to seed production. They play a crucial role in shaping the plant architecture through coordinating cell fate at meristem to organ boundaries. Identification of LBD genes from Brassica rapa gen
Braz. arch. biol. technol.. Publicado em: 29/11/2018
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5. Characterization and chromosomal mapping of the DgmarMITE transposon in populations of Dichotomius (Luederwaldtinia) sericeus species complex (Coleoptera: Scarabaeidae)
Abstract Transposable elements are dispersed repetitive DNA sequences that can move within the genome and are related to genome and chromosome evolution, adaptation, and speciation. The aim of this study was to characterize and determine the chromosomal location and accumulation of a Mariner-like element in populations of four phylogenetically related specie
Genet. Mol. Biol.. Publicado em: 04/06/2018
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6. Rbc2, a new dominant gene for resistance of soybean to Cowpea mild mottle virus: Inheritance and mapping
Abstract The objective of this work was to study the inheritance of soybean resistance to Soybean Steam Necrosis (SSN) and to map the resistance gene(s), using an F2 population from the cross between the soybean cultivars BRS 133 (resistant) and CD 206 (susceptible). A phenotypic evaluation was performed under controlled conditions, in a greenhouse. In a pop
Crop Breed. Appl. Biotechnol.. Publicado em: 2018-04
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7. Genome-wide association study of pre-harvest sprouting resistance in Chinese wheat founder parents
Abstract Pre-harvest sprouting (PHS) is a major abiotic factor affecting grain weight and quality, and is caused by an early break in seed dormancy. Association mapping (AM) is used to detect correlations between phenotypes and genotypes based on linkage disequilibrium (LD) in wheat breeding programs. We evaluated seed dormancy in 80 Chinese wheat founder pa
Genet. Mol. Biol.. Publicado em: 10/07/2017
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8. Future directions in breeding for disease resistance in aquaculture species
ABSTRACT Infectious disease is a major constraint for all species produced via aquaculture. The majority of farmed fish and shellfish production is based on stocks with limited or no selective breeding. Since disease resistance is almost universally heritable, there is huge potential to select for improved resistance to key diseases. This short review discus
R. Bras. Zootec.. Publicado em: 2017-06
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9. Optimized Exon-Exon Junction Library and its Application on Rodents' Brain Transcriptome Analysis
ABSTRACT Background: Alternative splicing (AS), which plays an important role in gene expression and functional regulation, has been analyzed on genome-scale by various bioinformatic approaches based on RNA-seq data. Compared with the huge number of studies on mouse, the AS researches approaching the rat, whose genome is intermedia between mouse and human,
Braz. arch. biol. technol.. Publicado em: 02/05/2017
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10. Development and validation of new SSR markers from expressed regions in the garlic genome
Only a limited number of simple sequence repeat (SSR) markers is available for the genome of garlic (Allium sativum L.) despite the fact that SSR markers have become one of the most preferred DNA marker systems. To develop new SSR markers for the garlic genome, garlic expressed sequence tags (ESTs) at the publicly available GarlicEST database were screened f
Sci. agric. (Piracicaba, Braz.). Publicado em: 2015-02
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11. Scattered organization of the histone multigene family and transposable elements in Synbranchus
The fish species Synbranchus marmoratus is widely distributed throughout the Neotropical region and exhibits a significant karyotype differentiation. However, data concerning the organization and location of the repetitive DNA sequences in the genomes of these karyomorphs are still lacking. In this study we made a physical mapping of the H3 and H4 histone mu
Genet. Mol. Biol.. Publicado em: 2014
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12. Chromosome mapping of ribosomal genes and histone H4 in the genus Radacridium (Romaleidae)
In this study, two species of Romaleidae grasshoppers, Radacridium mariajoseae and R.nordestinum, were analyzed after CMA3/DA/DAPI sequential staining and fluorescence in situ hybridization (FISH) to determine the location of the 18S and 5S rDNA and histone H4 genes. Both species presented karyotypes composed of 2n = 23, X0 with exclusively acrocentric chrom
Genet. Mol. Biol.. Publicado em: 19/07/2013